Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902667.1_cds_XP_016452705.1_46913
CDS Infomation

[gene=LOC107777231] [db_xref=GeneID:107777231] [protein=CSC1-like protein RXW8 isoform X4] [protein_id=XP_016452705.1] [location=join(64845..64858,65325..65471,65829..65892,66058..66267,66896..67075,69459..69757,70028..70298,71210..71512)] [gbkey=CDS]
Sequence

ATGATTGTTTTCAGTTTCCGAATATTCTCCATTGCAGCTATTCTGGGCCTTTTCCTGGTG
CTGCCTCTTAATTATTTTGGTCAAGATATTCGACGTCAGCAAATTCCAGCTGAGTCATTG
GAGGTATTCACTATTGTGAATGTTGAGGCAGGGTCAAGATGGTTCTGGGTGCACTGCCTT
GCACTGTATATTATATCCTGCTCTGCTTGTCTTCTTCTTTACTTTGAGTACAAAAGTATC
TCAAGGAAGCGGCTGGCGTACTTCACTTCATCACTTCGCCATCCAAGTTACTTCACAGTT
CTGGTCCGTGCTATCCCAAAGTCTCAGAAAGAATCATACAGTCATACAGTGGAAAAATTC
TTCACGAATTACTACGCATCAAGTTATTTATCTCATCAAATTGTTTATCGCTCTGGCCCT
GTTCAGAAACTGCTGACTGATGCAGAGGAGGTGTTCAAGATGCTTAAAACAGCCCCGGAA
GAACTTTGTCCTGGATCAAATTTAATGAGATGTGGCCTTTGTGGAGGAACAAATCACTCT
TTCAAGATGCTTCCTGCTGAGCGTGTTAGTGATAAAGGAAGAGATGATTCTGACGATTCA
GATTTGAGAAAAAAGGAGTCTGCAGCTGCTTTAGTTTTTTTCAGGAATCGGTATGCTGCT
TTAGTTGCTTCTCAAGGTCTTCAATCTAAGAATCCCATGTCATGGGTTACGGATCTTGCT
CCAGAACCAGATGATATGTACTGGTCAAACATCTGTGTTCCTTACAGACTCCTTTGGATT
CGTAGAGTTGCGCTCCTAGTGGCCTCTATACTTTTTGTGGCATTTTTCCTTGTGCCCGTT
TCACTAACACAAAGTCTTGTTCATCTCGACAAGCTGCAAAAGACATTTCCATTTCTTAAA
GGAATTTTAAAGAGGGAAGGAGTGACTCAGCTAGTCACTGGATATCTACCAAGTGTTGTA
TTAATTTTATTTTCCTACATTGTTCCTCCATTGATGATGCTATTTTCTAAAATGGAGGGC
TCTATCTCTCGTAGTGGCAGGAAGAGGAGTGCATGCATAAAAGTTATATACTTCTTCATC
TGGAATGTTTTCTTTGGTAACATTGTCTCCGGTTCTGTTATTGAGAGATTAAACAAAATC
TTTAAGGATGTAAACAATCTACTTTCAACGGCTGTGCCATCAACGGCCACCTTTTTTGTG
ACTTATGTTTTGACATCAGGCTGGGCAAGTCTCTCTGTTGAACTCATACAACCATTTGGT
ATCATCTGCAGATTGTTCTCCAGGTTTATTCTCAGAAACAGGGAACCATCATCTCATGGA
ACACTGACTTTTCCATACCATACAGAAGTTCCGAGGATCCTCCTATTTGGGCTTTTTGGC
TTTGCATATGCCATATTGGCACCTTTAATACTCCCATTCTTGGTGGTTTATTTTTCCATT
GCTTACTTTGTATATCGTAATCAGGTAAATACTCCCCATTTTGTTTAA

Peptide Sequence

PEP ID

XP_016452705.1
PEP Infomation

PREDICTED: CSC1-like protein RXW8 isoform X4 [Nicotiana tabacum]
Sequence

MIVFSFRIFSIAAILGLFLVLPLNYFGQDIRRQQIPAESLEVFTIVNVEAGSRWFWVHCL
ALYIISCSACLLLYFEYKSISRKRLAYFTSSLRHPSYFTVLVRAIPKSQKESYSHTVEKF
FTNYYASSYLSHQIVYRSGPVQKLLTDAEEVFKMLKTAPEELCPGSNLMRCGLCGGTNHS
FKMLPAERVSDKGRDDSDDSDLRKKESAAALVFFRNRYAALVASQGLQSKNPMSWVTDLA
PEPDDMYWSNICVPYRLLWIRRVALLVASILFVAFFLVPVSLTQSLVHLDKLQKTFPFLK
GILKREGVTQLVTGYLPSVVLILFSYIVPPLMMLFSKMEGSISRSGRKRSACIKVIYFFI
WNVFFGNIVSGSVIERLNKIFKDVNNLLSTAVPSTATFFVTYVLTSGWASLSVELIQPFG
IICRLFSRFILRNREPSSHGTLTFPYHTEVPRILLFGLFGFAYAILAPLILPFLVVYFSI
AYFVYRNQVNTPHFV

Transcript Sequence

Gene sequence data has not been registered.